🧬 nextflow run nf-core/sarek --input samplesheet.csv -profile docker
RUNNING
🖥️ htop - HPC Compute Node 04 [32 Cores | 128GB ECC RAM]
CPU 88%
💻 Bio-Matrix - Nucleotide Codon Hex Stream & GC% Monitor
GC 51.4%
📊 samtools view -h sample_tumor_recal.bam chr17:43044000-43125000
64K RDS/S
📈 R v4.4.1 (Bioconductor 3.19) - DESeq2 Differential Expression
ACTIVE
🔬 AlphaFold 3 - Target: ONCOGENIC_KINASE_DIMER (pLDDT: 92.4)
CUDA:0
🩺 Clinical VCF Stream - ClinVar / ACMG Class 5 Pathogenic Filter
ONCOLOGY
⚡ ONT PromethION 24 - Flowcell FLO-PRO114M (420 bp/s, N50 32kb)
2,180 PORES